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The fossil crocodylomorph fauna of the Cenozoic of South America is very rich and diverse. Historically, few publications have been dedicated to providing an overall review of this fauna, with most reviews focusing on specific areas. However, the fact that many new species, taxonomic reviews and description of new specimens have been proposed in the last decade makes a comprehensive review of the fossil crocodylomorph fauna of the South American Cenozoic necessary. The only crocodylomorph lineages to have a fossil record comprising Late Cretaceous and Cenozoic deposits in South America is the Dyrosauridae. Sebecidae or its predecessors, however, are very likely to have inhabited the continent during the Cretaceous-Paleogene transition as well; both Dyrosauridae and Sebecidae are considered here to have survived the Cretaceous-Paleogene extinction while inhabiting South America. Caimaninae (Alligatoroidea) arrived either in the late Cretaceous or in the early Paleocene coming from North America. The fossil record of Caimaninae is present, however, only from the Paleocene. By the Eocene, there are no records of Dyrosauridae in South America; this group was globally extinct after the Eocene, possibly due to the global cooling that occurred by the end of the epoch. Sebecids and caimanines solely comprised the crocodylomorph fauna of the continent until the Miocene, where there are the first records of Gavialoidea (Gryposuchinae) and a possible first dispersion of Crocodyloidea, through the tentative tomistomines Charactosuchus and Brasilosuchus. Gryposuchinae likely arrived in the continent from Africa or from Asia during the Oligocene. Charactosuchus and Brasilosuchus may have come from North America where tomistomines lived from the Oligocene to the Pliocene. Sebecids were extinct after the middle Miocene; Charactosuchus, Gryposuchinae, Purussaurus, Mourasuchus and durophagous caimanines such as Gnatusuchus were extinct after the late Miocene. These extinctions are related to changes in the drainage basins caused by elevation of the Andes mountain range. Only the extant caimanine Caiman, Melanosuchus and Paleosuchus would survive the Miocene, being enriched by Crocodylus from the Pliocene onwards, which is likely that Crocodylus arrived in the American continents from Africa. The current fossil record indicates that these four genera comprise the extant crocodylian fauna of the continent since the Pliocene. Although our knowledge on crocodylomorph fossil fauna of the South American Cenozoic has increased continuosly, especially in the last decade, much yet must be done, especially on the taxonomy and phylogeny of Brasilosuchus and Charactosuchus, field works in Paleogene and Pliocene localities, and the evolution of the specialized Caimaninae morphotypes.