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DOI | 10.1080/1062936X.2017.1311941 |
Application of IATA - A case study in evaluating the global and local performance of a Bayesian network model for skin sensitization | |
Fitzpatrick, J. M.; Patlewicz, G. | |
发表日期 | 2017 |
ISSN | 1062-936X |
卷号 | 28期号:4页码:297-310 |
英文摘要 | The information characterizing key events in an Adverse Outcome Pathway (AOP) can be generated from in silico, in chemico, in vitro and in vivo approaches. Integration of this information and interpretation for decision making are known as integrated approaches to testing and assessment (IATA). One such IATA was published by Jaworska et al., which describes a Bayesian network model known as ITS-2. The current work evaluated the performance of ITS-2 using a stratified cross-validation approach. We also characterized the impact of replacing the most significant component of the network, output from the expert system TIMES-SS, with structural alert information from the OECD Toolbox and Toxtree. Lack of structural alerts or TIMES-SS predictions yielded a sensitization potential prediction of 79%. If the TIMES-SS prediction was replaced by a structural alert indicator, the network predictivity increased up to 87%. The original network's predictivity was 89%. The local applicability domain of the original ITS-2 network was also evaluated using reaction mechanistic domains to understand what types of chemicals ITS-2 was able to make the best predictions for. We found that the original network was successful at predicting which chemicals would be sensitizers, but not at predicting their potency. |
英文关键词 | Skin sensitization;Adverse Outcome Pathway (AOP);IATA;ITS;QSAR;TIMES-SS;reaction domains;OECD QSAR Toolbox;Toxtree |
语种 | 英语 |
WOS记录号 | WOS:000401769500002 |
来源期刊 | SAR AND QSAR IN ENVIRONMENTAL RESEARCH
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来源机构 | 美国环保署 |
文献类型 | 期刊论文 |
条目标识符 | http://gcip.llas.ac.cn/handle/2XKMVOVA/62237 |
作者单位 | US EPA, Natl Ctr Computat Toxicol, Durham, NC 27709 USA |
推荐引用方式 GB/T 7714 | Fitzpatrick, J. M.,Patlewicz, G.. Application of IATA - A case study in evaluating the global and local performance of a Bayesian network model for skin sensitization[J]. 美国环保署,2017,28(4):297-310. |
APA | Fitzpatrick, J. M.,&Patlewicz, G..(2017).Application of IATA - A case study in evaluating the global and local performance of a Bayesian network model for skin sensitization.SAR AND QSAR IN ENVIRONMENTAL RESEARCH,28(4),297-310. |
MLA | Fitzpatrick, J. M.,et al."Application of IATA - A case study in evaluating the global and local performance of a Bayesian network model for skin sensitization".SAR AND QSAR IN ENVIRONMENTAL RESEARCH 28.4(2017):297-310. |
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