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DOI | 10.1016/j.watres.2013.02.060 |
Characterization of fecal concentrations in human and other animal sources by physical, culture-based, and quantitative real-time PCR methods | |
Ervin, Jared S.1,2; Russell, Todd L.3; Layton, Blythe A.4; Yamahara, Kevan M.6; Wang, Dan3; Sassoubre, Lauren M.3; Cao, Yiping4; Kelty, Catherine A.5; Sivaganesan, Mano5; Boehm, Alexandria B.3; Holden, Patricia A.1,2; Weisberg, Stephen B.4; Shanks, Orin C.5 | |
发表日期 | 2013-11-15 |
ISSN | 0043-1354 |
卷号 | 47期号:18页码:6873-6882 |
英文摘要 | The characteristics of fecal sources, and the ways in which they are measured, can profoundly influence the interpretation of which sources are contaminating a body of water. Although feces from various hosts are known to differ in mass and composition, it is not well understood how those differences compare across fecal sources and how differences depend on characterization methods. This study investigated how nine different fecal characterization methods provide different measures of fecal concentration in water, and how results varied across twelve different fecal pollution sources. Sources investigated included chicken, cow, deer, dog, goose, gull, horse, human, pig, pigeon, septage and sewage. A composite fecal slurry was prepared for each source by mixing feces from 6 to 22 individual samples with artificial freshwater. Fecal concentrations were estimated by physical (wet fecal mass added and total DNA mass extracted), culture-based (Escherichia coli and enterococci by membrane filtration and defined substrate), and quantitative real-time PCR (Bacteroidales, E. coli, and enterococci) characterization methods. The characteristics of each composite fecal slurry and the relationships between physical, culture-based and qPCR-based characteristics varied within and among different fecal sources. An in silico exercise was performed to assess how different characterization methods can impact identification of the dominant fecal pollution source in a mixed source sample. A comparison of simulated 10:90 mixtures based on enterococci by defined substrate predicted a source reversal in 27% of all possible combinations, while mixtures based on E. coli membrane filtration resulted in a reversal 29% of the time. This potential for disagreement in minor or dominant source identification based on different methods of measurement represents an important challenge for water quality managers and researchers. Published by Elsevier Ltd. |
英文关键词 | Water quality;Fecal indicator bacteria;Quantitative real-time PCR;Escherichia coli;Enterococci;Bacteroidales;Microbial source tracking |
语种 | 英语 |
WOS记录号 | WOS:000328444000007 |
来源期刊 | WATER RESEARCH
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来源机构 | 美国环保署 |
文献类型 | 期刊论文 |
条目标识符 | http://gcip.llas.ac.cn/handle/2XKMVOVA/60512 |
作者单位 | 1.Univ Calif Santa Barbara, Earth Res Inst, Santa Barbara, CA 93106 USA; 2.Univ Calif Santa Barbara, Bren Sch Environm Sci & Management, Santa Barbara, CA 93106 USA; 3.Stanford Univ, Dept Civil & Environm Engn, Stanford, CA 94305 USA; 4.Southern Calif Coastal Water Res Project, Costa Mesa, CA 92626 USA; 5.US EPA, Off Res & Dev, Natl Risk Management Res Lab, Cincinnati, OH 45268 USA; 6.Stanford Univ, Ctr Ocean Solut, Stanford, CA 94305 USA |
推荐引用方式 GB/T 7714 | Ervin, Jared S.,Russell, Todd L.,Layton, Blythe A.,et al. Characterization of fecal concentrations in human and other animal sources by physical, culture-based, and quantitative real-time PCR methods[J]. 美国环保署,2013,47(18):6873-6882. |
APA | Ervin, Jared S..,Russell, Todd L..,Layton, Blythe A..,Yamahara, Kevan M..,Wang, Dan.,...&Shanks, Orin C..(2013).Characterization of fecal concentrations in human and other animal sources by physical, culture-based, and quantitative real-time PCR methods.WATER RESEARCH,47(18),6873-6882. |
MLA | Ervin, Jared S.,et al."Characterization of fecal concentrations in human and other animal sources by physical, culture-based, and quantitative real-time PCR methods".WATER RESEARCH 47.18(2013):6873-6882. |
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