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DOI10.1016/j.mimet.2016.08.013
Optimization of a sample processing protocol for recovery of Bacillus anthracis spores from soil
Silvestri, Erin E.1; Feldhake, David2; Griffin, Dale3; Lisle, John3; Nichols, Tonya L.4; Shah, Sanjiv R.4; Pemberton, Adin2; Schaefer, Frank W., III1
发表日期2016-11-01
ISSN0167-7012
卷号130页码:6-13
英文摘要

Following a release of Bacillus anthracis spores into the environment, there is a potential for lasting environmental contamination in soils. There is a need for detection protocols for B. anthracis in environmental matrices. However, identification of B. anthracis within a soil is a difficult task. Processing soil samples helps to remove debris, chemical components, and biological impurities that can interfere with microbiological detection. This study aimed to optimize a previously used indirect processing protocol, which included a series of washing and centrifugation steps. Optimization of the protocol included: identifying an ideal extraction diluent, variation in the number of wash steps, variation in the initial centrifugation speed, sonication and shaking mechanisms. The optimized protocol was demonstrated at two laboratories in order to evaluate the recovery of spores from loamy and sandy soils. The new protocol demonstrated an improved limit of detection for loamy and sandy soils over the non-optimized protocol with an approximate matrix limit of detection at 14 spores/g of soil. There were no significant differences overall between the two laboratories for either soil type, suggesting that the processing protocol will be robust enough to use at multiple laboratories while achieving comparable recoveries. Published by Elsevier B.V.


英文关键词Bacillus anthracis;Spores;Sand;Loam;Soil;Indirect processing
语种英语
WOS记录号WOS:000386406900002
来源期刊JOURNAL OF MICROBIOLOGICAL METHODS
来源机构美国环保署
文献类型期刊论文
条目标识符http://gcip.llas.ac.cn/handle/2XKMVOVA/59312
作者单位1.US EPA, Natl Homeland Secur Res Ctr, 26 W Martin Luther King Dr,MS NG16, Cincinnati, OH 45268 USA;
2.Pegasus Tech Serv Inc, 46 East Hollister St, Cincinnati, OH 45219 USA;
3.US Geol Survey, Coastal & Marine Sci Ctr, 600 4th St South, St Petersburg, FL 33701 USA;
4.US EPA, Natl Homeland Secur Res Ctr, 1200 Penn Ave NW,MS 8801R, Washington, DC 20460 USA
推荐引用方式
GB/T 7714
Silvestri, Erin E.,Feldhake, David,Griffin, Dale,et al. Optimization of a sample processing protocol for recovery of Bacillus anthracis spores from soil[J]. 美国环保署,2016,130:6-13.
APA Silvestri, Erin E..,Feldhake, David.,Griffin, Dale.,Lisle, John.,Nichols, Tonya L..,...&Schaefer, Frank W., III.(2016).Optimization of a sample processing protocol for recovery of Bacillus anthracis spores from soil.JOURNAL OF MICROBIOLOGICAL METHODS,130,6-13.
MLA Silvestri, Erin E.,et al."Optimization of a sample processing protocol for recovery of Bacillus anthracis spores from soil".JOURNAL OF MICROBIOLOGICAL METHODS 130(2016):6-13.
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