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DOI10.1128/AEM.03581-13
Age-Related Shifts in the Density and Distribution of Genetic Marker Water Quality Indicators in Cow and Calf Feces
Shanks, Orin C.1; Kelty, Catherine A.1; Peed, Lindsay1; Sivaganesan, Mano1; Mooney, Thomas2; Jenkins, Michael3
发表日期2014-03-01
ISSN0099-2240
卷号80期号:5页码:1588-1594
英文摘要

Calves make up about 16% of the current bovine population in the United States and can excrete high levels of human pathogens in their feces. We describe the density and distribution of genetic markers from 9 PCR- and real-time quantitative PCR-based assays, including CF128, CF193, CowM2, CowM3, GenBac3, Entero1, EC23S857, CampF2, and ttr-6, commonly used to help assess ambient surface water quality. Each assay was tested against a collection of 381 individual bovine fecal samples representing 31 mother and calf pairings collected over a 10-month time period from time of birth through weaning. Genetic markers reported to be associated with ruminant and/or bovine fecal pollution were virtually undetected in calves for up to 115 days from birth, suggesting that physiological changes in calf ruminant function impact host-associated genetic marker shedding. In addition, general fecal indicator markers for Bacteroidales, Escherichia coli, and Enterococcus spp. exhibited three separate trends across time, indicating that these bacteria respond differently to age-related physiological and dietary changes during calf development. The results of this study suggest that currently available PCR-based water quality indicator technologies can under-or overestimate fecal pollution originating from calves and identify a need for novel calf-associated source identification methods.


语种英语
WOS记录号WOS:000331626300006
来源期刊APPLIED AND ENVIRONMENTAL MICROBIOLOGY
来源机构美国环保署
文献类型期刊论文
条目标识符http://gcip.llas.ac.cn/handle/2XKMVOVA/58931
作者单位1.US EPA, Off Res & Dev, Natl Risk Management Res Lab, Cincinnati, OH 45268 USA;
2.Univ Cincinnati, Cincinnati, OH USA;
3.ARS, USDA, Natl Sedimentat Lab, Water Qual & Ecol Res Unit, Oxford, MS USA
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Shanks, Orin C.,Kelty, Catherine A.,Peed, Lindsay,et al. Age-Related Shifts in the Density and Distribution of Genetic Marker Water Quality Indicators in Cow and Calf Feces[J]. 美国环保署,2014,80(5):1588-1594.
APA Shanks, Orin C.,Kelty, Catherine A.,Peed, Lindsay,Sivaganesan, Mano,Mooney, Thomas,&Jenkins, Michael.(2014).Age-Related Shifts in the Density and Distribution of Genetic Marker Water Quality Indicators in Cow and Calf Feces.APPLIED AND ENVIRONMENTAL MICROBIOLOGY,80(5),1588-1594.
MLA Shanks, Orin C.,et al."Age-Related Shifts in the Density and Distribution of Genetic Marker Water Quality Indicators in Cow and Calf Feces".APPLIED AND ENVIRONMENTAL MICROBIOLOGY 80.5(2014):1588-1594.
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