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DOI10.1093/gbe/evt182
Genomic, RNAseq, and Molecular Modeling Evidence Suggests That the Major Allergen Domain in Insects Evolved from a Homodimeric Origin
Randall, Thomas A.1; Perera, Lalith2; London, Robert E.2; Mueller, Geoffrey A.2
发表日期2013
ISSN1759-6653
卷号5期号:12页码:2344-2358
英文摘要

The major allergen domain (MA) is widely distributed in insects. The crystal structure of a single Bla g 1 MA revealed a novel protein fold in which the fundamental structure was a duplex of two subsequences (monomers), which had diverged over time. This suggested that the evolutionary origin of the MA structure may have been a homodimer of this smaller subsequence. Using publicly available genomic data, the distribution of the basic unit of this class of proteins was determined to better understand its evolutionary history. The duplication and divergence is examined at three distinct levels of resolution: 1) within the orders Diptera and Hymenoptera, 2) within one genus Drosophila, and 3) within one species Aedes aegypti. Within the family Culicidae, we have found two separate occurrences of monomers as independent genes. The organization of the gene family in A. aegypti shows a common evolutionary origin for its monomer and several closely related MAs. Molecular modeling of the A. aegypti monomer with the unique Bla g 1 fold confirms the distant evolutionary relationship and supports the feasibility of homodimer formation from a single monomer. RNAseq data for A. aegypti confirms that the monomer is expressed in the mosquito similar to other A. aegypti MAs after a blood meal. Together, these data support the contention that the detected monomer shares similar functional characteristics to related MAs in other insects. An extensive search for this domain outside of Insecta confirms that the MAs are restricted to insects.


英文关键词SDMA;molecular modeling;genome;gene family;tandem duplication;synteny;ortholog;gene expression;RNAseq;Bla g 1;ANG12;allergen
语种英语
WOS记录号WOS:000329250400008
来源期刊GENOME BIOLOGY AND EVOLUTION
来源机构美国环保署
文献类型期刊论文
条目标识符http://gcip.llas.ac.cn/handle/2XKMVOVA/57845
作者单位1.Natl Inst Environm Hlth Sci, Res Triangle Pk, NC USA;
2.Natl Inst Environm Hlth Sci, Struct Biol Lab, Res Triangle Pk, NC USA
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Randall, Thomas A.,Perera, Lalith,London, Robert E.,et al. Genomic, RNAseq, and Molecular Modeling Evidence Suggests That the Major Allergen Domain in Insects Evolved from a Homodimeric Origin[J]. 美国环保署,2013,5(12):2344-2358.
APA Randall, Thomas A.,Perera, Lalith,London, Robert E.,&Mueller, Geoffrey A..(2013).Genomic, RNAseq, and Molecular Modeling Evidence Suggests That the Major Allergen Domain in Insects Evolved from a Homodimeric Origin.GENOME BIOLOGY AND EVOLUTION,5(12),2344-2358.
MLA Randall, Thomas A.,et al."Genomic, RNAseq, and Molecular Modeling Evidence Suggests That the Major Allergen Domain in Insects Evolved from a Homodimeric Origin".GENOME BIOLOGY AND EVOLUTION 5.12(2013):2344-2358.
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