Climate Change Data Portal
DOI | 10.1093/gbe/evt182 |
Genomic, RNAseq, and Molecular Modeling Evidence Suggests That the Major Allergen Domain in Insects Evolved from a Homodimeric Origin | |
Randall, Thomas A.1; Perera, Lalith2; London, Robert E.2; Mueller, Geoffrey A.2 | |
发表日期 | 2013 |
ISSN | 1759-6653 |
卷号 | 5期号:12页码:2344-2358 |
英文摘要 | The major allergen domain (MA) is widely distributed in insects. The crystal structure of a single Bla g 1 MA revealed a novel protein fold in which the fundamental structure was a duplex of two subsequences (monomers), which had diverged over time. This suggested that the evolutionary origin of the MA structure may have been a homodimer of this smaller subsequence. Using publicly available genomic data, the distribution of the basic unit of this class of proteins was determined to better understand its evolutionary history. The duplication and divergence is examined at three distinct levels of resolution: 1) within the orders Diptera and Hymenoptera, 2) within one genus Drosophila, and 3) within one species Aedes aegypti. Within the family Culicidae, we have found two separate occurrences of monomers as independent genes. The organization of the gene family in A. aegypti shows a common evolutionary origin for its monomer and several closely related MAs. Molecular modeling of the A. aegypti monomer with the unique Bla g 1 fold confirms the distant evolutionary relationship and supports the feasibility of homodimer formation from a single monomer. RNAseq data for A. aegypti confirms that the monomer is expressed in the mosquito similar to other A. aegypti MAs after a blood meal. Together, these data support the contention that the detected monomer shares similar functional characteristics to related MAs in other insects. An extensive search for this domain outside of Insecta confirms that the MAs are restricted to insects. |
英文关键词 | SDMA;molecular modeling;genome;gene family;tandem duplication;synteny;ortholog;gene expression;RNAseq;Bla g 1;ANG12;allergen |
语种 | 英语 |
WOS记录号 | WOS:000329250400008 |
来源期刊 | GENOME BIOLOGY AND EVOLUTION
![]() |
来源机构 | 美国环保署 |
文献类型 | 期刊论文 |
条目标识符 | http://gcip.llas.ac.cn/handle/2XKMVOVA/57845 |
作者单位 | 1.Natl Inst Environm Hlth Sci, Res Triangle Pk, NC USA; 2.Natl Inst Environm Hlth Sci, Struct Biol Lab, Res Triangle Pk, NC USA |
推荐引用方式 GB/T 7714 | Randall, Thomas A.,Perera, Lalith,London, Robert E.,et al. Genomic, RNAseq, and Molecular Modeling Evidence Suggests That the Major Allergen Domain in Insects Evolved from a Homodimeric Origin[J]. 美国环保署,2013,5(12):2344-2358. |
APA | Randall, Thomas A.,Perera, Lalith,London, Robert E.,&Mueller, Geoffrey A..(2013).Genomic, RNAseq, and Molecular Modeling Evidence Suggests That the Major Allergen Domain in Insects Evolved from a Homodimeric Origin.GENOME BIOLOGY AND EVOLUTION,5(12),2344-2358. |
MLA | Randall, Thomas A.,et al."Genomic, RNAseq, and Molecular Modeling Evidence Suggests That the Major Allergen Domain in Insects Evolved from a Homodimeric Origin".GENOME BIOLOGY AND EVOLUTION 5.12(2013):2344-2358. |
条目包含的文件 | 条目无相关文件。 |
除非特别说明,本系统中所有内容都受版权保护,并保留所有权利。