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DOI10.1080/1062936X.2018.1455223
An evaluation of selected (Q)SARs/expert systems for predicting skin sensitisation potential
Fitzpatrick, J. M.1; Roberts, D. W.2; Patlewicz, G.1
发表日期2018
ISSN1062-936X
卷号29期号:6页码:439-468
英文摘要

Predictive testing to characterise substances for their skin sensitisation potential has historically been based on animal models such as the Local Lymph Node Assay (LLNA) and the Guinea Pig Maximisation Test (GPMT). In recent years, EU regulations, have provided a strong incentive to develop non-animal alternatives, such as expert systems software. Here we selected three different types of expert systems: VEGA (statistical), Derek Nexus (knowledge-based) and TIMES-SS (hybrid), and evaluated their performance using two large sets of animal data: one set of 1249 substances from eChemportal and a second set of 515 substances from NICEATM. A model was considered successful at predicting skin sensitisation potential if it had at least the same balanced accuracy as the LLNA and the GPMT had in predicting the other outcomes, which ranged from 79% to 86%. We found that the highest balanced accuracy of any of the expert systems evaluated was 65% when making global predictions. For substances within the domain of TIMES-SS, however, balanced accuracies for the two datasets were found to be 79% and 82%. In those cases where a chemical was within the TIMES-SS domain, the TIMES-SS skin sensitisation hazard prediction had the same confidence as the result from LLNA or GPMT.


英文关键词(Q)SAR;expert system;TIMES-SS;VEGA;Derek Nexus;skin sensitisation
语种英语
WOS记录号WOS:000435125200002
来源期刊SAR AND QSAR IN ENVIRONMENTAL RESEARCH
来源机构美国环保署
文献类型期刊论文
条目标识符http://gcip.llas.ac.cn/handle/2XKMVOVA/57638
作者单位1.US EPA, NCCT, Res Triangle Pk, NC 27711 USA;
2.Liverpool John Moores Univ, Sch Pharm, Liverpool, Merseyside, England
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GB/T 7714
Fitzpatrick, J. M.,Roberts, D. W.,Patlewicz, G.. An evaluation of selected (Q)SARs/expert systems for predicting skin sensitisation potential[J]. 美国环保署,2018,29(6):439-468.
APA Fitzpatrick, J. M.,Roberts, D. W.,&Patlewicz, G..(2018).An evaluation of selected (Q)SARs/expert systems for predicting skin sensitisation potential.SAR AND QSAR IN ENVIRONMENTAL RESEARCH,29(6),439-468.
MLA Fitzpatrick, J. M.,et al."An evaluation of selected (Q)SARs/expert systems for predicting skin sensitisation potential".SAR AND QSAR IN ENVIRONMENTAL RESEARCH 29.6(2018):439-468.
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