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DOI	10.1007/s11756-021-00969-6
	Plastid genome insight to the taxonomic problem for Aconitum pendulum and A. flavum (Ranunculaceae)
	Li, Qiang; Xia, Mingze; Yu, Jingya; Chen, Shilong; Zhang, Faqi
通讯作者	Chen, SL ; Zhang, FQ (通讯作者)，Chinese Acad Sci, Northwest Inst Plateau Biol, Key Lab Adaptat & Evolut Plateau Biota, Xining 810008, Peoples R China. ; Chen, SL ; Zhang, FQ (通讯作者)，Chinese Acad Sci, Inst Sanjiangyuan Natl Pk, Xining 810008, Peoples R China. ; Zhang, FQ (通讯作者)，Qinghai Prov Key Lab Crop Mol Breeding, Xining 810008, Peoples R China.
发表日期	2022
ISSN	0006-3088
EISSN	1336-9563
起始页码	953
结束页码	966
卷号	77 期号:4
英文摘要	As the original species of traditional Chinese medicine Tie Bang Chui, the distribution of the Aconitum pendulum and A. flavum almost wholly overlap. This study compared the complete plastid genome (plastome) of A. flavum and A. pendulum to assess their phylogenetic relationships. The plastome sizes of A. flavum range from 155,642 bp (A. flavum MW839582) to 155,717 bp (A. flavum MW839579), A. pendulum range from 155,667 bp (A. pendulum MW839577) to 155,713 bp (A. pendulum MW839581). The plastomes are identical, with 131 genes, including eight rRNA genes, 37 tRNA genes, 86 protein-coding genes, and one pseudogene. Long repeats sequences were present in both coding regions and non-coding regions. There were highly variables in the non-coding region both in intra- and interspecies levels. Nine highly variable regions were detected that were suitable for phylogenetic analysis. Moreover, in the protein-coding region, rpoC1 was more divergent in intraspecies level. Furthermore, protein-coding genes were ideal for species delimitation in Aconitum species than highly variated regions. Phylogenetic analysis suggests that individuals of A. pendulum and A. flavum were not clustered by species. It might be affected by geographical and ecological factors. A. flavum and A. pendulum have similar morphological characteristics, overlap geographical distribution, highly identical plastome structure, and indistinct phylogenetic relationship. Further research for the two species is necessary, such as population genetic study, to reveal they are the same or two distinct species.
关键词	COMPLETE CHLOROPLAST GENOME PHYLOGENY EVOLUTION POLYMORPHISM HISTORY CHOICE PLANTS
英文关键词	Aconitum; Plastid genome; Phylogeny; Qinghai-Tibetan plateau
语种	英语
WOS研究方向	Life Sciences & Biomedicine - Other Topics
WOS类目	Biology
WOS记录号	WOS:000753734100001
来源期刊	BIOLOGIA
来源机构	中国科学院西北生态环境资源研究院
文献类型	期刊论文
条目标识符	http://gcip.llas.ac.cn/handle/2XKMVOVA/254294
作者单位	[Li, Qiang; Xia, Mingze; Yu, Jingya; Chen, Shilong; Zhang, Faqi] Chinese Acad Sci, Northwest Inst Plateau Biol, Key Lab Adaptat & Evolut Plateau Biota, Xining 810008, Peoples R China; [Li, Qiang; Xia, Mingze; Yu, Jingya; Chen, Shilong; Zhang, Faqi] Chinese Acad Sci, Inst Sanjiangyuan Natl Pk, Xining 810008, Peoples R China; [Li, Qiang; Xia, Mingze; Yu, Jingya] Univ Chinese Acad Sci, Beijing 100049, Peoples R China; [Zhang, Faqi] Qinghai Prov Key Lab Crop Mol Breeding, Xining 810008, Peoples R China
推荐引用方式 GB/T 7714	Li, Qiang,Xia, Mingze,Yu, Jingya,et al. Plastid genome insight to the taxonomic problem for Aconitum pendulum and A. flavum (Ranunculaceae)[J]. 中国科学院西北生态环境资源研究院,2022,77(4).
APA	Li, Qiang,Xia, Mingze,Yu, Jingya,Chen, Shilong,&Zhang, Faqi.(2022).Plastid genome insight to the taxonomic problem for Aconitum pendulum and A. flavum (Ranunculaceae).BIOLOGIA,77(4).
MLA	Li, Qiang,et al."Plastid genome insight to the taxonomic problem for Aconitum pendulum and A. flavum (Ranunculaceae)".BIOLOGIA 77.4(2022).