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| DOI | 10.1016/j.marpolbul.2019.02.040 |
| Metagenomic analysis of tarball-associated bacteria from Goa; India | |
| Fernandes C.; Kankonkar H.; Meena R.M.; Menezes G.; Shenoy B.D.; Khandeparker R. | |
| 发表日期 | 2019 |
| ISSN | 0025326X |
| 起始页码 | 398 |
| 结束页码 | 403 |
| 卷号 | 141 |
| 英文摘要 | The beaches of Goa state in India are frequently polluted with tarballs, specifically during pre-monsoon and monsoon seasons. Tarballs contain hydrocarbons, including polycyclic aromatic hydrocarbons, which pose significant environmental risks. Microbes associated with tarballs reportedly possess capabilities to degrade toxic hydrocarbons present in tarballs. In this study, bacterial diversity associated with tarballs from Vagator and Morjim beaches of north Goa was analysed based on V3–V4 regions of 16S rRNA gene sequenced using Illumina Miseq Platform. The Proteobacterial members were dominant in both Vagator (≥85.5%) and Morjim (≥94.0%) samples. Many of the identified taxa have been previously reported as hydrocarbon degraders (e.g. Halomonas, Marinobacter) or possible human pathogens (e.g. Acinetobacter, Klebsiella, Rhodococcus, Staphylococcus, Vibrio). This is the first study reported on a metagenomic analysis of bacteria associated with tarballs from Goa. © 2019 Elsevier Ltd |
| 英文关键词 | Diversity; NGS; Oil pollution; OTU; Petroleum hydrocarbons |
| 语种 | 英语 |
| scopus关键词 | Atmospheric thermodynamics; Beaches; Polycyclic aromatic hydrocarbons; RNA; Associated bacteria; Bacterial diversity; Diversity; Environmental risks; Hydrocarbon degraders; Metagenomic analysis; Oil pollution; Petroleum hydrocarbons; Bacteria; RNA 16S; petroleum; polycyclic aromatic hydrocarbon; RNA 16S; bacterium; beach; genomics; marine pollution; monsoon; oil pollution; petroleum hydrocarbon; species diversity; Acinetobacter; amplicon; Article; bacterium; degradation; gene sequence; genetic analysis; Halomonas; India; Klebsiella; Marinobacter; metagenomics; nonhuman; Proteobacteria; Rhodococcus; RNA gene; species diversity; Staphylococcus; Vibrio; analysis; bioremediation; environmental monitoring; genetics; human; isolation and purification; metagenome; metagenomics; microflora; procedures; water pollutant; Goa; India; Acinetobacter; Bacteria (microorganisms); Halomonas; Klebsiella; Marinobacter; Proteobacteria; Rhodococcus; Staphylococcus; Vibrio; Biodegradation, Environmental; Environmental Monitoring; Humans; India; Marinobacter; Metagenome; Metagenomics; Microbiota; Petroleum; Polycyclic Aromatic Hydrocarbons; Proteobacteria; RNA, Ribosomal, 16S; Water Pollutants, Chemical |
| 来源期刊 | Marine Pollution Bulletin
 |
| 文献类型 | 期刊论文 |
| 条目标识符 | http://gcip.llas.ac.cn/handle/2XKMVOVA/150013 |
| 作者单位 | Biological Oceanography Division, CSIR-National Institute of Oceanography, Dona Paula, Goa 403004, India; CSIR-National Institute of Oceanography Regional Centre, 176, Lawson's Bay Colony, Visakhapatnam, Andhra Pradesh 530017, India |
| 推荐引用方式 GB/T 7714 | Fernandes C.,Kankonkar H.,Meena R.M.,et al. Metagenomic analysis of tarball-associated bacteria from Goa; India[J],2019,141. |
| APA | Fernandes C.,Kankonkar H.,Meena R.M.,Menezes G.,Shenoy B.D.,&Khandeparker R..(2019).Metagenomic analysis of tarball-associated bacteria from Goa; India.Marine Pollution Bulletin,141. |
| MLA | Fernandes C.,et al."Metagenomic analysis of tarball-associated bacteria from Goa; India".Marine Pollution Bulletin 141(2019). |
| 条目包含的文件 | 条目无相关文件。 | |||||
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