气候变化领域集成服务门户(CCPortal): The draft genome of the fast-growing non-timber forest species moso bamboo (Phyllostachys heterocycla)

CCPortal

DOI	10.1038/ng.2569
	The draft genome of the fast-growing non-timber forest species moso bamboo (Phyllostachys heterocycla)
	Peng, Zhenhua; Lu, Ying; Li, Lubin; Zhao, Qiang; Feng, Qi; Gao, Zhimin; Lu, Hengyun; Hu, Tao; Yao, Na; Liu, Kunyan; Li, Yan; Fan, Danlin; Guo, Yunli; Li, Wenjun; Lu, Yiqi; Weng, Qijun; Zhou, CongCong; Zhang, Lei; Huang, Tao; Zhao, Yan; Zhu, Chuanrang; Liu, Xinge; Yang, Xuewen; Wang, Tao; Miao, Kun; Zhuang, Caiyun; Cao, Xiaolu; Tang, Wenli; Liu, Guanshui; Liu, Yingli; Chen, Jie; Liu, Zhenjing; Yuan, Licai; Liu, Zhenhua; Huang, Xuehui; Lu, Tingting; Fei, Benhua; Ning, Zemin; Han, Bin; Jiang, Zehui
发表日期	2013
ISSN	1061-4036
EISSN	1546-1718
卷号	45 期号:4
英文摘要	Bamboo represents the only major lineage of grasses that is native to forests and is one of the most important non-timber forest products in the world. However, no species in the Bambusoideae subfamily has been sequenced. Here, we report a high-quality draft genome sequence of moso bamboo (P. heterocycla var. pubescens). The 2.05-Gb assembly covers 95% of the genomic region. Gene prediction modeling identified 31,987 genes, most of which are supported by cDNA and deep RNA sequencing data. Analyses of clustered gene families and gene collinearity show that bamboo underwent whole-genome duplication 7-12 million years ago. Identification of gene families that are key in cell wall biosynthesis suggests that the whole-genome duplication event generated more gene duplicates involved in bamboo shoot development. RNA sequencing analysis of bamboo flowering tissues suggests a potential connection between drought-responsive and flowering genes.
学科领域	Genetics & Heredity
语种	英语
WOS研究方向	Genetics & Heredity
来源期刊	NATURE GENETICS
来源机构	中国科学院西北生态环境资源研究院
文献类型	期刊论文
条目标识符	http://gcip.llas.ac.cn/handle/2XKMVOVA/111706
作者单位	Chinese Acad Forestry, Res Inst Forestry, Key Lab Tree Breeding & Cultivat, State Forestry Adm, Beijing, Peoples R China
推荐引用方式 GB/T 7714	Peng, Zhenhua,Lu, Ying,Li, Lubin,et al. The draft genome of the fast-growing non-timber forest species moso bamboo (Phyllostachys heterocycla)[J]. 中国科学院西北生态环境资源研究院,2013,45(4).
APA	Peng, Zhenhua.,Lu, Ying.,Li, Lubin.,Zhao, Qiang.,Feng, Qi.,...&Jiang, Zehui.(2013).The draft genome of the fast-growing non-timber forest species moso bamboo (Phyllostachys heterocycla).NATURE GENETICS,45(4).
MLA	Peng, Zhenhua,et al."The draft genome of the fast-growing non-timber forest species moso bamboo (Phyllostachys heterocycla)".NATURE GENETICS 45.4(2013).