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DOI10.1016/j.ecoinf.2019.100983
An exhaustive analysis of heuristic methods for variable selection in ecological niche modeling and species distribution modeling
Cobos, Marlon E.1,4; Peterson, A. Townsend1,4; Osorio-Olvera, Luis1,2; Jimenez-Garcia, Daniel1,3
发表日期2019
ISSN1574-9541
EISSN1878-0512
卷号53
英文摘要

Ecological niche models and species distribution models are used in many fields of science. Despite their popularity, only recently have important aspects of the modeling process like model selection been developed. Choosing environmental variables with which to create these models is another critical part of the process, but methods currently in use are not consistent in their results and no comprehensive approach exists by which to perform this step. Here, we compared seven heuristic methods of variable selection against a novel approach that proposes to select best sets of variables by evaluating performance of models created with all combinations of variables and distinct parameter settings of the algorithm in concert. Our results were that-except for the jackknife method for one of the 12 species and fluctuation index for two of the 12 species-none of the heuristic methods for variable selection coincided with the exhaustive one. Performance decreased in models created using variables selected with heuristic methods and both underfitting and overfitting were detected when comparing their geographic projections with the ones of models created with variables selected with the exhaustive method. Using the exhaustive approach could be time consuming, so a two-step exercise may be necessary. However, using this method identifies adequate variable sets and parameter settings in concert that are associated with increased model performance.


WOS研究方向Environmental Sciences & Ecology
来源期刊ECOLOGICAL INFORMATICS
文献类型期刊论文
条目标识符http://gcip.llas.ac.cn/handle/2XKMVOVA/102377
作者单位1.Univ Kansas, Biodivers Inst, Dept Ecol & Evolutionary Biol, Lawrence, KS 66045 USA;
2.Ctr Cambio Global & Sustentabilidad Sureste AC, 142 Centenario Inst Juarez, Villahermosa, Tabasco, Mexico;
3.Benemerita Univ Autonoma Puebla, Ctr Agroecol & Ambiente, Inst Ciencias, Puebla, Puebla, Mexico;
4.Univ Kansas, Biodivers Inst, 1345 Jayhawk Blvd, Lawrence, KS 66045 USA
推荐引用方式
GB/T 7714
Cobos, Marlon E.,Peterson, A. Townsend,Osorio-Olvera, Luis,et al. An exhaustive analysis of heuristic methods for variable selection in ecological niche modeling and species distribution modeling[J],2019,53.
APA Cobos, Marlon E.,Peterson, A. Townsend,Osorio-Olvera, Luis,&Jimenez-Garcia, Daniel.(2019).An exhaustive analysis of heuristic methods for variable selection in ecological niche modeling and species distribution modeling.ECOLOGICAL INFORMATICS,53.
MLA Cobos, Marlon E.,et al."An exhaustive analysis of heuristic methods for variable selection in ecological niche modeling and species distribution modeling".ECOLOGICAL INFORMATICS 53(2019).
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